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	<title>DIGITAL TOOL</title>
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	<link>http://www.dtool.com</link>
	<description>Thoughts on Personalized Medicine, Clouds, Security, &#38; Other Things</description>
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		<title>Personalized Medicine &#8211; Not Quite Almost Ready</title>
		<link>http://www.dtool.com/2010/10/15/personalized-medicine/</link>
		<comments>http://www.dtool.com/2010/10/15/personalized-medicine/#comments</comments>
		<pubDate>Fri, 15 Oct 2010 19:21:27 +0000</pubDate>
		<dc:creator>admin</dc:creator>
				<category><![CDATA[New Medicine]]></category>
		<category><![CDATA[breast cancer]]></category>
		<category><![CDATA[colon cancer]]></category>
		<category><![CDATA[diagnostic assays]]></category>
		<category><![CDATA[diagnostic results]]></category>
		<category><![CDATA[disparate databases]]></category>
		<category><![CDATA[genomics]]></category>
		<category><![CDATA[http://www.genome.duke.edu/cores]]></category>
		<category><![CDATA[networking capabilities]]></category>
		<category><![CDATA[Personalized medicine]]></category>
		<category><![CDATA[proteomics]]></category>

		<guid isPermaLink="false">http://www.dtool.com/?p=14</guid>
		<description><![CDATA[The revolution hasn&#8217;t quite arrived &#8211; yet. But, “personalized medicine” (PM &#8211; to my mind – the tight linkage of diagnostic results to therapeutic strategies) is an inevitable outcome of the current state-of-the-art knowledge of genomics, proteomics, combined with recent &#8230; <a href="http://www.dtool.com/2010/10/15/personalized-medicine/">Continue reading <span class="meta-nav">&#8594;</span></a>]]></description>
			<content:encoded><![CDATA[<p>The revolution hasn&#8217;t quite arrived &#8211; yet.</p>
<p>But, “<a href="http://www.dtool.com/tag/personalized-medicine/" class="st_tag internal_tag" rel="tag" title="Posts tagged with Personalized medicine">personalized medicine</a>” (PM &#8211; to my mind – the tight linkage of <a href="http://www.dtool.com/tag/diagnostic-results/" class="st_tag internal_tag" rel="tag" title="Posts tagged with diagnostic results">diagnostic results</a> to therapeutic strategies) is an inevitable outcome of the current state-of-the-art knowledge of <a href="http://www.dtool.com/tag/genomics/" class="st_tag internal_tag" rel="tag" title="Posts tagged with genomics">genomics</a>, <a href="http://www.dtool.com/tag/proteomics/" class="st_tag internal_tag" rel="tag" title="Posts tagged with proteomics">proteomics</a>, combined with recent advances in computational, database, &amp; <a href="http://www.dtool.com/tag/networking-capabilities/" class="st_tag internal_tag" rel="tag" title="Posts tagged with networking capabilities">networking capabilities</a>; &amp; that the practice of personalized medicine, at least at the institutional level, will soon be a requirement – not an option &#8211; for many types of treatment. The corollary of this is that institutions who implement these capabilities soon &amp; well, will thrive – those that do not, will be seen as second-tier care centers. There are already numerous examples of PM that are being practiced today such as those defined by companies like Genomic Health who provide unique <a href="http://www.dtool.com/tag/diagnostic-assays/" class="st_tag internal_tag" rel="tag" title="Posts tagged with diagnostic assays">diagnostic assays</a> for ER+ <a href="http://www.dtool.com/tag/breast-cancer/" class="st_tag internal_tag" rel="tag" title="Posts tagged with breast cancer">breast cancer</a> or stage II+ <a href="http://www.dtool.com/tag/colon-cancer/" class="st_tag internal_tag" rel="tag" title="Posts tagged with colon cancer">colon cancer</a>. Most large pharmas &amp; even giants such as Medco are moving toward making PM pay.</p>
<p>What does, “tight linkage of diagnostic results to therapeutic strategies” really entail? I think that there are two key elements – technology &amp; process. The technology piece primarily involves linking together multiple, <a href="http://www.dtool.com/tag/disparate-databases/" class="st_tag internal_tag" rel="tag" title="Posts tagged with disparate databases">disparate databases</a>, providing the computational horsepower to rationally data mine the combined resources, &amp; to provide the properly authenticated &amp; authorized physicians, nurses, &amp; researchers with timely access to the results.</p>
<p>None of the technology is particularly novel, but hooking up all of the pieces correctly is &#8211; &amp; I can imagine that some parts of that process will be a bit painful.</p>
<p>I believe that an example of a good (but not perfect) model for the tech side of personalized medicine can be found at the Duke IGSP. Please see this URL if you’re interested:  <a href="http://www.genome.duke.edu/cores/">http://www.genome.duke.edu/cores/</a></p>
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		<title>What is &#8220;The Cloud&#8221;?</title>
		<link>http://www.dtool.com/2010/10/07/what-is-the-cloud/</link>
		<comments>http://www.dtool.com/2010/10/07/what-is-the-cloud/#comments</comments>
		<pubDate>Fri, 08 Oct 2010 04:30:06 +0000</pubDate>
		<dc:creator>admin</dc:creator>
				<category><![CDATA[Cloud Computing]]></category>
		<category><![CDATA[amazon ec2]]></category>
		<category><![CDATA[Amazon Elastic Compute Cloud]]></category>
		<category><![CDATA[API]]></category>
		<category><![CDATA[Cloud computing]]></category>
		<category><![CDATA[Cloud infrastructure]]></category>
		<category><![CDATA[Cloud testing]]></category>
		<category><![CDATA[Everything as a service]]></category>
		<category><![CDATA[Google]]></category>
		<category><![CDATA[google apps]]></category>
		<category><![CDATA[infrastructure]]></category>
		<category><![CDATA[performance security]]></category>
		<category><![CDATA[redundancy]]></category>
		<category><![CDATA[reliability]]></category>
		<category><![CDATA[Software plus services]]></category>

		<guid isPermaLink="false">http://67.202.60.114/?p=5</guid>
		<description><![CDATA[Cloud computing comes into focus only when you think about what IT always needs: a way to increase capacity or add capabilities on the fly without investing in new infrastructure, training new personnel, or licensing new software. Cloud computing encompasses &#8230; <a href="http://www.dtool.com/2010/10/07/what-is-the-cloud/">Continue reading <span class="meta-nav">&#8594;</span></a>]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.dtool.com/tag/cloud-computing-2/" class="st_tag internal_tag" rel="tag" title="Posts tagged with Cloud computing">Cloud computing</a> comes into focus only when you think about what IT always needs: a way to increase capacity or add capabilities on the fly without investing in new <a href="http://www.dtool.com/tag/infrastructure/" class="st_tag internal_tag" rel="tag" title="Posts tagged with infrastructure">infrastructure</a>, training new personnel, or licensing new software. <a href="http://www.dtool.com/tag/cloud-computing-2/" class="st_tag internal_tag" rel="tag" title="Posts tagged with Cloud computing">Cloud computing</a> encompasses any subscription-based or pay-per-use service that, in real time over the Internet, extends IT&#8217;s existing capabilities.</p>
<p>There are several ways to classify different cloud architectures, but the three most prevalent are:</p>
<ol>
<li>Infrastructure as service         [example: <a href="http://www.dtool.com/tag/amazon-ec2/" class="st_tag internal_tag" rel="tag" title="Posts tagged with amazon ec2">Amazon EC2</a>]</li>
<li>Platform as service         [example: <a href="http://www.dtool.com/tag/google/" class="st_tag internal_tag" rel="tag" title="Posts tagged with Google">Google</a> <a href="http://www.dtool.com/tag/api/" class="st_tag internal_tag" rel="tag" title="Posts tagged with API">API</a>'s]</li>
<li>Software as service        [examples:  Salesforce,  <a href="http://www.dtool.com/tag/google-apps/" class="st_tag internal_tag" rel="tag" title="Posts tagged with google apps">Google Apps</a>]</li>
</ol>
<p>The issues surrounding the cloud (besides the obvious one of vendors rapidly pushing incomplete software to market) are:</p>
<ol>
<li><a href="http://www.dtool.com/tag/reliability/" class="st_tag internal_tag" rel="tag" title="Posts tagged with reliability">Reliability</a></li>
<li><a href="http://www.dtool.com/tag/redundancy/" class="st_tag internal_tag" rel="tag" title="Posts tagged with redundancy">Redundancy</a></li>
<li>Latency</li>
<li>Performance</li>
<li>Security</li>
</ol>
<p>I&#8217;ll talk about each of these in turn in the next few posts. BTW&#8230; This website is hosted in the cloud &#8211; Amazon&#8217;s Elastic Compute Cloud (EC2) &#8211; to be more precise.</p>
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